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  • Dataset 10.15468/2ze5cv

    • DiSSCo-ITINERIS dataset

    CNR-ISA Agri-food Microorganism Dataset (ISA01-CC)

    (Double-click on the below map to enlarge it).

    doi
    https://doi.org/10.15468/2ze5cv
    Version
    1.1
    Created
    2024-08-08 (16:37:16)
    Modified
    2025-02-13 (15:51:02)
    Publication
    2025-02-12 (00:00:00)
    Language
    eng
    Home Page
    https://biomemory.cnr.it/collections/CNR-ISA-CC
    Dataset Label
    ISA01-CC
    Dataset Type
    Occurrence
    Dataset subtype
    Specimen
    Description
    The ISA01-CC dataset includes about 300 strains of lactic acid bacteria and 400 strains of yeasts. The strains are mainly isolated from the Mediterranean agro-food systems and typical fermented foods (sourdough, dairy products, wine and grape, cereals, whey) and human faeces. The main species collected among lactic acid bacteria are: Levilactobacillus brevis, Companilactobacillus alimentarius, Leuconostoc pseudomesenteroides, Fructilactobacillus sanfranciscensis, Lacticaseibacillus casei, Lacticaseibacillus rhamnosus, etc. The main species collected among yeasts are Saccharomyces cerevisiae, Hanseniaspora guilliermondii, H. uvarum, Pichia kudriavzevii, Met. fructicula.
    Purpose

    Food, Functional Foods, Nutraceuticals, Health, Biocontrol agents, Biofuel

    Keywords
    Occurrence, Yeasts, Issatchenkia orientalis, Metschnikowia fructicola, Hanseniaspora uvarum, Culture Strains, Kluyveromyces marxianus, Metschnikowia pulcherrima, Debaryomyces delbrueckii, Bacteria, Saccharomyces cerevisiae, Lactobacillus, Specimen, Functional Foods, Health, Biofuel, Biocontrol agents, Food, Nutraceuticals
    License
    http://creativecommons.org/licenses/by-nc/4.0/legalcode
    Collection

    Name: ISA Culture Collection (CNR-ISA-CC)
    Identifier: 04f88630-cb9a-42f6-b46b-c1f2f9a9d430
    Specimen Preservation Method: OTHER

    Taxonomic Coverage
    Lactic acid bacteria belonging to the following genera: Lactobacillus, Companilactobacillus, Lacticaseibacillus, Latilactobacillus, Lactiplantibacillus, Furfurilactobacillus, Limosilactobacillus, Fructilactobacillus, Levilactobacillus, Leuconostoc, Weissella and Pediococcus. Yeasts belonging to genera: Hanseniaspora, Rhodotorula, Metschnikowia and Pichia.
    Kingdom: Fungi
    Family: Micrococcaceae
    Family: Saccharomycetaceae
    Order: Saccharomycetales
    Phylum: Firmicutes
    Class: Actinomycetia
    Family: Saccharomycodaceae
    Class: Bacilli
    Family: Pichiaceae
    Phylum: Actinobacteriota
    Class: Saccharomycetes
    Phylum: Ascomycota
    Family: Metschnikowiaceae
    Kingdom: Bacteria
    Order: Actinomycetales
    Family: Lactobacillaceae
    Phylum: Bacillota
    Order: Lactobacillales
    Geographic Coverage
    Italy
    Min Latitude: 36.529
    Max Latitude: 47.103
    Min Longitude: 6.519
    Max Longitude: 18.536
    Global Coverage: n/a
    Temporal Coverages
    2015-current
    Citation
    d’Acierno A, Nazzaro F, Reale A, Sorrentino A, Rossi M, Bucci G, Ianigro M (2025). CNR-ISA Agri-food Microorganism Dataset (ISA01-CC). Version 1.1. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Occurrence dataset https://doi.org/10.15468/2ze5cv accessed via GBIF.org on 2025-05-03.
    Endpoints
    DWC ARCHIVE: https://ipt.ibbr.cnr.it/ipt/archive.do?r=isa01-cc
    EML: https://ipt.ibbr.cnr.it/ipt/eml.do?r=isa01-cc
    Identifiers
    UUID: aebc4372-55b7-4ddf-8bd1-5693eb67e8b3
    URL: https://ipt.ibbr.cnr.it/ipt/resource?r=isa01-cc
    UUID: a514f970-a594-25d8-446d-37c51b949cb8
    Contributors

    Antonio d’Acierno (Originator)
    Researcher
    CNR-ISA-AV, Institute of Food Sciences (ISA) - Section of Avellino, National Research Council of Italy
    https://orcid.org/0000-0003-0516-0794
    antonio.dacierno@isa.cnr.it

    Filomena Nazzaro (Originator)
    Research director
    CNR-ISA-AV, Institute of Food Sciences (ISA) - Section of Avellino, National Research Council of Italy
    https://orcid.org/0000-0002-5759-7499
    filomena.nazzaro@isa.cnr.it

    Anna Reale (Originator)
    Responsible for molecular identification
    CNR-ISA-AV, Institute of Food Sciences (ISA) - Section of Avellino, National Research Council of Italy
    https://orcid.org/0000-0001-5576-257X
    anna.reale@isa.cnr.it

    Alida Sorrentino (Originator)
    Researcher
    CNR-ISA-AV, Institute of Food Sciences (ISA) - Section of Avellino, National Research Council of Italy
    https://orcid.org/0000-0002-8396-3384
    alida.sorrentino@isa.cnr.it

    Mauro Rossi (Originator)
    Research Director
    CNR-ISA-AV, Institute of Food Sciences (ISA) - Section of Avellino, National Research Council of Italy
    https://orcid.org/0000-0001-8631-1683
    mauro.rossi@isa.cnr.it

    Gabriele Bucci (Metadata author)
    Senior Researcher
    CNR-IBBR, Institute of Biosciences and Bio Resources, National Research Council of Italy
    https://orcid.org/0000-0001-8931-0344
    gabriele.bucci@cnr.it

    Massimo Ianigro (Metadata author)
    Senior Technologist
    CNR-IRSA-BA, Water Research Institute (IRSA) - Section of Bari, National Research Council of Italy
    https://orcid.org/0000-0003-1256-771X
    massimo.ianigro@irsa.ba.cnr.it

    Dept. of Bio-Agrifood Sciences (Content provider)
    Research Department
    National Research Council of Italy (CNR)
    segreteria.disba@cnr.it

    Michelangelo Pascale (Administrative point of contact)
    Director of the Collection
    CNR-ISA-AV, Institute of Food Sciences (ISA) - Section of Avellino
    https://orcid.org/0000-0002-3898-1030
    michelangelo.pascale@isa.cnr.it

    Project

    ITINERIS - Italian Integrated Environmental Research Infrastructures System / BIOMEMORY

    Identifier: PNRR Project IR0000032 || CNR-DiSBA no. SAC.AD002.173

    Content: ITINERIS (PNRR Project IR0000032) Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity aims to provide biodiversity (meta)data linked to Natural Science Collections (NSC) in terms of extended digital specimens fully linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) that have been created and maintained through past and current research projects. BIOMEMORY (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project aims to create a network of biobanks (i.e., scientific research collections) where data and metadata associated with biological samples of different natures are collected and stored systematically and well-organized. Maintaining the existing collections will allow their future use for many purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals, and plants.

    Funding: ITINERIS project no. IR0000032 — ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || BIOMEMORY (CNR-DiSBA Project No. SAC.AD002.173

    Funder details:
    Funder Name: Consiglio Nazionale delle Ricerche
    Funder Identifiers: https://doi.org/10.13039/501100004462
    Award Number: CNR-DiSBA no. SAC.AD002.173
    Title: Bio Memory Project (CNR-DiSBA)
    Award Url: https://www.disba.cnr.it/en/
    Funder Name: Ministero dell'Università e della Ricerca
    Funder Identifiers: https://doi.org/10.13039/501100004462
    Award Number: PNRR Project IR0000032
    Title: ITINERIS - Italian Integrated Environmental Research Infrastructures System
    Award Url: https://itineris.cnr.it/
    Project people:

    Antonio d’Acierno (Metadata author)
    https://orcid.org/0000-0003-0516-0794

    Filomena Nazzaro (Author)
    https://orcid.org/0000-0002-5759-7499

    Anna Reale (Author)
    https://orcid.org/0000-0001-5576-257X

    Alida Sorrentino (Author)
    https://orcid.org/0000-0002-8396-3384

    Mauro Rossi (Author)
    https://orcid.org/0000-0001-8631-1683

    Gabriele Bucci (Administrative point of contact)
    https://orcid.org/0000-0001-8931-0344

    Sampling
    n/a
    Additional Info
    Samples collected and analyzed within the following research projects: MIRRI-IT (https://www.mirri-it.it/), SUS-MIRRI (https://www.sus-mirri.it/)
    Acknowledgements
    PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being.
    IR0000032 – ITINERIS, Italian Integrated Environmental Research Infrastructures System (D.D. n. 130/2022 - CUP B53C22002150006) Funded by EU - Next Generation EU PNRR- Mission 4 “Education and Research” - Component 2: “From research to business” - Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures”
      National Research Council of Italy. All Rights Reserved.
      Credits

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