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  • Dataset 10.15468/3ccqf4

    • DiSSCo-ITINERIS dataset

    Abies alba natural populations of Italy and Balkans (IBBR-ABIES-ALBA)

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    doi
    https://doi.org/10.15468/3ccqf4
    Version
    1.2
    Created
    2023-04-26 (17:29:04)
    Modified
    2025-02-18 (14:18:16)
    Publication
    2025-02-18 (00:00:00)
    Language
    eng
    Home Page
    https://biomemory.cnr.it/collections/cnr-ibbr-dnafor
    Dataset Label
    IBBR-ABIES-ALBA
    Dataset Type
    Occurrence
    Dataset subtype
    Specimen
    Description
    Some 1168 silver fir trees from 24 natural populations sampled across italy and the Balkanian peninsula have been fully genotyped using a set of 16 SSR loci. Needles have been collected from georeferenced, individual trees in the forest, transported to the lab and kept at -80 °C for long-term storage. DNA has been extracted from each tissue sample for purpose of population genetic studies and evolutionary history reconstruction, and it is currently maintained at -20 *C for future research.
    Purpose

    Population genetics, Infraspecific biodiversity, Phylogeography, Adaptation, Climate change

    Keywords
    Occurrence, Abies alba, Gene flow, Silver fir, Conservation, Genetic diversity, Forest trees, Specimen
    License
    http://creativecommons.org/licenses/by/4.0/legalcode
    Collection

    Name: DNA and samples for genetic analyses on forest trees (CNR-IBBR-DNAFOR)
    Identifier: 90a41989-9906-41d4-aff9-0dc8420c7a45
    Specimen Preservation Method: DRIED

    Taxonomic Coverage
    Natural populations of Abies alba Mill.
    Kingdom: Plantae
    Order: Pinales
    Phylum: Tracheophyta
    Class: Pinopsida
    Family: Pinaceae
    Geographic Coverage
    Italy, Romania, Bulgaria, Serbia
    Min Latitude: 38.144
    Max Latitude: 46.49
    Min Longitude: 6.889
    Max Longitude: 24.696
    Global Coverage: n/a
    Temporal Coverages
    2016-2017
    Citation
    Piotti A, Bagnoli F, Avanzi C, Spanu I, Vendramin G G, Postolache D, Brousseau L, Leonarduzzi C, Leonardi S, Bucci G, Ianigro M (2025). Abies alba natural populations of Italy and Balkans (IBBR-ABIES-ALBA). Version 1.2. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Occurrence dataset https://doi.org/10.15468/3ccqf4 accessed via GBIF.org on 2025-05-03.
    Endpoints
    DWC ARCHIVE: https://ipt.ibbr.cnr.it/ipt/archive.do?r=ibbr-abies-alba
    EML: https://ipt.ibbr.cnr.it/ipt/eml.do?r=ibbr-abies-alba
    Identifiers
    UUID: b039a7fc-9e9a-438e-9187-5ada8a69c5b3
    URL: https://ipt.ibbr.cnr.it/ipt/resource?r=ibbr-abies-alba
    Contributors

    Andrea Piotti (Originator)
    Researcher
    CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino, National Research Council of Italy
    https://orcid.org/gabriele.bucci@cnr.it
    andrea.piotti@ibbr.cnr.it

    Francesca Bagnoli (Originator)
    Researcher
    CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino, National Research Council of Italy
    https://orcid.org/0000-0001-6909-0006
    francesca.bagnoli@ibbr.cnr.it

    Camilla Avanzi (Originator)
    Researcher
    CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino, National Research Council of Italy
    https://orcid.org/0000-0003-1632-5304
    camilla.avanzi@ibbr.cnr.it

    Ilaria Spanu (Originator)
    Researcher
    CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino, National Research Council of Italy
    ilaria.spanu@ibbr.cnr.it

    Giovanni Giuseppe Vendramin (Originator)
    Research Director
    CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino, National Research Council of Italy
    https://orcid.org/gabriele.bucci@cnr.it
    giovanni.vendramin@ibbr.cnr.it

    Dragos Postolache (Originator)
    National Research and Development Institute in Forestry "Marin Dracea"
    https://orcid.org/0000-0001-5250-8752

    Louise Brousseau (Originator)
    INRA, UR629 URFM Ecologie des Forêts Méditerranéennes
    https://orcid.org/0000-0003-2769-2767

    Cristina Leonarduzzi (Originator)
    CNR-IBBR Institute of Biosciences and Bioresources, National Research Council of Italy
    https://orcid.org/0000-0002-3826-885X

    Stefano Leonardi (Originator)
    University of Parma
    https://orcid.org/0000-0002-9133-318X

    Gabriele Bucci (Metadata author)
    Senior Researcher
    CNR-IBBR, Institute of Biosciences and Bio Resources, National Research Council of Italy
    https://orcid.org/0000-0001-8931-0344
    gabriele.bucci@cnr.it

    Massimo Ianigro (Metadata author)
    Senior Technologist
    CNR-IRSA-BA, Water Research Institute (IRSA) - Section of Bari, National Research Council of Italy
    https://orcid.org/gabriele.bucci@cnr.it
    massimo.ianigro@irsa.ba.cnr.it

    Institute of Biosciences and Bio Resources CNR-IBBR (Content provider)
    Research Institute
    National Research Council of Italy (CNR)

    Dept. of Bio-Agrifood Sciences (Owner)
    National Research Council of Italy (CNR)

    Andrea Piotti (Administrative point of contact)
    Reference Person
    CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino
    https://orcid.org/gabriele.bucci@cnr.it
    andrea.piotti@ibbr.cnr.it

    Project

    ITINERIS - Italian Integrated Environmental Research Infrastructures System | BIOMEMORY Project

    Identifier: PNRR Project IR0000032 | CNR-DiSBA no. SAC.AD002.173

    Content: ITINERIS - Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity aims to provide biodiversity (meta)data linked to Natural Science Collections (NSC) in terms of extended digital specimens fully linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) that have been created and maintained through past and current research projects. Bio Memory (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project aims to create a network of biobanks (i.e., scientific research collections) where data and metadata associated with biological samples of different natures are collected and stored in a systematic and well-organized way. Maintaining the existing collections will allow their future use for many purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals, and plants.

    Funding: PNRR project IR0000032 - ITINERIS, Italian Integrated Environmental Research Infrastructures System - CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU - Next Generation EU - Mission 4 “Education and Research” - Component 2: “From research to business” - Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || Bio Memory (CNR-DiSBA Project No. SAC.AD002.173)

    Funder details:
    Funder Name: Consiglio Nazionale delle Ricerche
    Funder Identifiers: https://doi.org/10.13039/501100004462
    Award Number: CNR-DiSBA no. SAC.AD002.173
    Title: Bio Memory Project (CNR-DiSBA)
    Award Url: https://www.disba.cnr.it/en/
    Funder Name: Ministero dell'Università e della Ricerca
    Funder Identifiers: https://doi.org/10.13039/501100021856
    Award Number: PNRR Project IR0000032
    Title: ITINERIS - Italian Integrated Environmental Research Infrastructures System
    Award Url: https://itineris.cnr.it/
    Project people:

    Gabriele Bucci (Custodian steward)
    https://orcid.org/0000-0001-8931-0344

    Giovanni Giuseppe Vendramin (Principal investigator)
    https://orcid.org/0000-0001-9921-7872

    Eleonora Fornaro (Programmer)
    https://orcid.org/0009-0008-0886-5339

    Marina Tumolo (Author)
    https://orcid.org/0000-0001-8182-0454

    Domenico De Paola (Author)
    https://orcid.org/0000-0001-5667-3114

    Massimo Ianigro (Programmer)
    https://orcid.org/0000-0003-1256-771X

    Sampling
    n/a
    Additional Info
    A sample of preserved material is available upon request for authors.
    Acknowledgements
    PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being.
    IR0000032 – ITINERIS, Italian Integrated Environmental Research Infrastructures System (D.D. n. 130/2022 - CUP B53C22002150006) Funded by EU - Next Generation EU PNRR- Mission 4 “Education and Research” - Component 2: “From research to business” - Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures”
      National Research Council of Italy. All Rights Reserved.
      Credits

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