DiSSCo-ITINERIS dataset

Mediterranean Germplasm Genebank - Hordeum dataset (ITA436-MGG-Hordeum)

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Version
1.4
Created
2023-04-24 (16:28:49)
Modified
2024-11-25 (11:44:17)
Publication
2024-11-25 (00:00:00)
Language
eng
Dataset Label
ITA436-MGG-Hordeum
Dataset Type
Occurrence
Dataset subtype
Specimen
Description
The dataset contains about 2000 accessions of several species of Hordeum (barley) from the Mediterranean Germplasm seed bank in Bari (Italy). Seeds have been collected by the personnel of CNR-IBBR throughout the Mediterranean Basin (Spain, Italy, Greece, Cyprus, Morocco, Algeria, Tunisia, Egypt, etc.), middle East (Syria, Yemen, Iraq, Iran, etc.), and Eastern Africa (Ethiopia), but also provenances from Asia (India, Nepal, etc.) are included. Seeds are maintained in sealed cans at -20 °C (long-term storage) and paper bags at 4 °C (short-term storage), and periodically checked for germination and refreshed. Seed lots are available upon request at https://ibbr.cnr.it/mgd/ or by contacting mgd.staff@ibbr.cnr.it.
Purpose

The Mediterranean Germplasm Database (MGD) is the digital twin of the agri-food plant seed collection (Mediterranean Germplasm Genebank - MGG) maintained at the Institute of Biosciences and BioResources (IBBR) of the Italian National Research Council (CNR) in Bari, Italy. Overall, the collection preserves more than 59,000 accessions of 870 species from 203 genera and 39 families (mainly Poaceae, Fabaceae, Solanaceae, Brassicaceae, Asteraceae, etc.). Over 13,000 samples have been collected over time and georeferenced by IBBR exploration teams, while others have been acquired from other Institutions through exchange activities.

The main objective of MGG is to preserve the genetic resources of herbaceous plants of interest for Mediterranean agriculture. Particular attention is dedicated to specific segments of plant genetic resources, such as local varieties (including "typical products") or endangered agroecotypes, wild relatives of crops, and plants potentially useful for extracting bioactive or biotechnological compounds. The main commitments of MGG since 1970 are (i) the collection, conservation, and distribution of PGR; (ii) the characterization and evaluation of PGRs and the analysis of their genetic structure; (ii) the selection and pre-breeding of PGR, and the recognition of useful genes.

The seed bank is endowed with refrigerated rooms at 4 °C, 0 °C, and -20 °C, where more than 14,700 kg of seeds are currently stored.

Keywords
Occurrence, Barley; Genebank; Agriculture; Food; Bioremediation; Biofuels; Pharma; Health, Specimen
Collection

Name: Mediterranean Germplasm Genebank (MGG)
Identifier: https://www.gbif.org/grscicoll/collection/15ae67ae-82f3-449a-9e78-c336989b8f90
Specimen Preservation Method: DRIED

Taxonomic Coverage
Hordeum vulgare, Hordeum murinum, Hordeum bulbosum, Hordeum maritimum, Hordeum sp. (Poaceae)
Order: Poales
Class: Liliopsida
Family: Poaceae
Kingdom: Plantae
Phylum: Tracheophyta
Geographic Coverage
Italy, Spain, Greece, Mediterranean Basin, North Africa, Eastern Africa
Min Latitude: 5.15
Max Latitude: 46.860001
Min Longitude: -9.6
Max Longitude: 40.116669
Global Coverage: n/a
Temporal Coverages
1971-present
Citation
Laghetti G, De Paola D, Scarascia M, Cataldo P, Stimolo L, Direnzo P, Giunta R, Rapanà N, Urbano M, Vendramin G G, Balestrini R, Bucci G, Ianigro M, Fornaro E, Tumolo M (2024). Mediterranean Germplasm Genebank - Hordeum dataset (ITA436-MGG-Hordeum). Version 1.4. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Occurrence dataset https://doi.org/10.15468/bxc8pe accessed via GBIF.org on 2025-05-03.
Identifiers
Contributors

Gaetano Laghetti (Originator)
Senior Research Scientist
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters, National Research Council of Italy
https://orcid.org/0000-0002-0892-3307
gaetano.laghetti@ibbr.cnr.it

Domenico De Paola (Originator)
Researcher
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters, National Research Council of Italy
https://orcid.org/0000-0001-5667-3114
domenico.depaola@cnr.it

Marisa Scarascia (Originator)
Technician/Metadata manager
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters, National Research Council of Italy
marisa.scarascia@ibbr.cnr.it

Pasquale Cataldo (Originator)
Technician/Metadata Manager
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters, National Research Council of Italy
pasquale.cataldo@ibbr.cnr.it

Lucia Stimolo (Originator)
Technician responsible for the collection storage
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters, National Research Council of Italy
lucia.stimolo@ibbr.cnr.it

Paolo Direnzo (Originator)
Technician
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters, National Research Council of Italy
https://orcid.org/0000-0002-0564-5022
paolo.direnzo@cnr.it

Rosella Giunta (Originator)
Technician
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters, National Research Council of Italy
https://orcid.org/0000-0001-9957-4845
rosella.giunta@cnr.it

Nicoletta Rapanà (Originator)
Technician
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters, National Research Council of Italy
nicoletta.rapana@ibbr.cnr.it

Marcella Urbano (Originator)
Researcher
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters, National Research Council of Italy
https://orcid.org/0000-0002-8529-4778
marcella.urbano@ibbr.cnr.it

Giovanni Giuseppe Vendramin (Originator)
Research Director
CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino, National Research Council of Italy
https://orcid.org/0000-0001-9921-7872
giovanni.vendramin@ibbr.cnr.it

Raffaella Balestrini (Originator)
Institute Head - Reference person
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters
https://orcid.org/0000-0001-7958-7681
raffaellamaria.balestrini@cnr.it

Gabriele Bucci (Metadata author)
Senior Researcher
CNR-IBBR, Institute of Biosciences and Bio Resources, National Research Council of Italy
https://orcid.org/0000-0001-8931-0344
gabriele.bucci@cnr.it

Massimo Ianigro (Metadata author)
Senior Technologist
CNR-IRSA-BA, Water Research Institute (IRSA) - Section of Bari, National Research Council of Italy
https://orcid.org/0000-0003-1256-771X
massimo.ianigro@irsa.ba.cnr.it

Eleonora Fornaro (Metadata author)
IT Technician
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters, National Research Council of Italy
https://orcid.org/0009-0008-0886-5339
eleonora.fornaro@cnr.it

Marina Tumolo (Metadata author)
Technician
National Research Council of Italy
https://orcid.org/0000-0001-8182-0454
marina.tumolo@cnr.it

Institute of Biosciences and Bio Resources CNR-IBBR (Content provider)
Research Institute
National Research Council of Italy (CNR)
mgd.staff@ibbr.cnr.it

Department of Bio-Agri-Food Sciences CNR-DiSBA (Content provider)
National Research Council of Italy

Gaetano Laghetti (Administrative point of contact)
Reference Person
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters
https://orcid.org/0000-0002-0892-3307
gaetano.laghetti@ibbr.cnr.it

Domenico De Paola (Administrative point of contact)
Researcher
CNR-IBBR-BA, Institute of Biosciences and Bioresources (IBBR) - Headquarters, National Research Council of Italy
https://orcid.org/0000-0001-5667-3114
domenico.depaola@cnr.it

Project

ITINERIS - Italian Integrated Environmental Research Infrastructures System || BIOMEMORY Project

Identifier: PNRR Project IR0000032 || CNR-DiSBA no. SAC.AD002.173

Content: ITINERIS - Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity aims to provide biodiversity (meta)data linked to Natural Science Collections (NSC) in terms of extended digital specimens fully linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) that have been created and maintained through past and current research projects. || Bio Memory (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project aims to create a network of biobanks (i.e., scientific research collections) where data and metadata associated with biological samples of different natures are collected and stored systematically and well-organized.

Funding: PNRR project IR0000032 - ITINERIS, Italian Integrated Environmental Research Infrastructures System - CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU - Next Generation EU - Mission 4 “Education and Research” - Component 2: “From research to business” - Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || Bio Memory (CNR-DiSBA Project No. SAC.AD002.173) - The Italian network of biological collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being.

Funder details:
Funder Name: Consiglio Nazionale delle Ricerche
Funder Identifiers: https://doi.org/10.13039/501100004462
Award Number: CNR-DiSBA no. SAC.AD002.173
Title: Bio Memory Project (CNR-DiSBA)
Award Url: https://www.disba.cnr.it/en/
Funder Name: Ministero dell'Università e della Ricerca
Funder Identifiers: https://doi.org/10.13039/501100021856
Award Number: PNRR Project IR0000032
Title: ITINERIS - Italian Integrated Environmental Research Infrastructures System
Award Url: https://itineris.cnr.it/
Project people:

Domenico De Paola (Curator)
https://orcid.org/0000-0001-5667-3114

Giovanni Giuseppe Vendramin (Principal investigator)
https://orcid.org/0000-0001-9921-7872

Gabriele Bucci (Custodian steward)
https://orcid.org/0000-0001-8931-0344

Massimo Ianigro (Programmer)
https://orcid.org/0000-0003-1256-771X

Eleonora Fornaro (Programmer)
https://orcid.org/0009-0008-0886-5339

Marina Tumolo (Metadata author)
https://orcid.org/0000-0001-8182-0454

Raffaella Balestrini (Point of contact)
https://orcid.org/0000-0001-7958-7681

Sampling
Method Steps:
Additional Info
A full list of the projects involving the seed bank is reported on the IBBR project page (http://ibbr.cnr.it/ibbr/projects).
Acknowledgements
PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being.
IR0000032 – ITINERIS, Italian Integrated Environmental Research Infrastructures System (D.D. n. 130/2022 - CUP B53C22002150006) Funded by EU - Next Generation EU PNRR- Mission 4 “Education and Research” - Component 2: “From research to business” - Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures”
  National Research Council of Italy. All Rights Reserved.

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