Overall records: 33,976
doi: https://doi.org/10.15468/frm59p
Record Count: 14,310
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: The dataset includes about 14,000 accessions from 29 Triticum species maintained at the Mediterranean Germplasm Genebank (MGG) in Bari (Italy). More details are available at https://ibbr.cnr.it/mgd/ Seeds are maintained in sealed cans at -20 °C (long-term storage) and paper bags at 4 °C (short-term storage), and periodically checked for germination and refreshed. Seed lots are available upon request at https://ibbr.cnr.it/mgd/ or by contacting mgd.staff@ibbr.cnr.it.
Keywords: Occurrence, Durum wheat, Triticum spp., Ancient wheat germplasm, Wheat, Specimen, Germplasm, Crop Wild Relatives (CWR), Breeding, Crops, Agriculture, Wild Food Plants (WFP), Weedy Plants, Food
Parent Collection: CNR-IBBR-MGG
Parent Institution: CNR-IBBR-BA
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by/4.0/legalcode
doi: https://doi.org/10.15468/rpej8x
Record Count: 10,310
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: This dataset contains about 10,000 accessions of more than 200 different species collected worldwide and maintained at the Mediterranean Germplasm Genebank (MGG) in Bari (Italy). Main families are: Amaranthaceae, Amaryllidaceae, Apiaceae, Apocynaceae, Asparagaceae, Asteraceae, Bignoniaceae, Boraginaceae, Brassicaceae, Cannaceae, Capparaceae, Caryophyllaceae, Compositae, Convolvulaceae, Cruciferae, Cucurbitaceae, Euphorbiaceae, Fabaceae, Lamiaceae, Liliaceae, Linaceae, Lythraceae, Malvaceae, Orobanchaceae, Papaveraceae, Pedaliaceae, Plantaginaceae, Poaceae, Poligonaceae, Polygonaceae, Ranunculaceae, Rutaceae, Saponifere, Solanaceae, Tropaeolaceae, Valerianaceae. Seeds are maintained in sealed cans at -20 °C (long-term storage) and paper bags at 4 °C (short-term storage), and periodically checked for germination and refreshed. Seed lots are available upon request at https://ibbr.cnr.it/mgd/ or by contacting mgd.staff@ibbr.cnr.it.
Keywords: Occurrence, Mediterranean crop species, Crop Wild Relatives (CWR), Seeds, Agriculture, Wild Food Plants (WFP), Weedy Plants, Bioremediation, Biofuels, Gene Bank, Specimen
Parent Collection: CNR-IBBR-MGG
Parent Institution: CNR-IBBR-FI
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/bxc8pe
Record Count: 2,003
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: The dataset contains about 2000 accessions of several species of Hordeum (barley) from the Mediterranean Germplasm seed bank in Bari (Italy). Seeds have been collected by the personnel of CNR-IBBR throughout the Mediterranean Basin (Spain, Italy, Greece, Cyprus, Morocco, Algeria, Tunisia, Egypt, etc.), middle East (Syria, Yemen, Iraq, Iran, etc.), and Eastern Africa (Ethiopia), but also provenances from Asia (India, Nepal, etc.) are included. Seeds are maintained in sealed cans at -20 °C (long-term storage) and paper bags at 4 °C (short-term storage), and periodically checked for germination and refreshed. Seed lots are available upon request at https://ibbr.cnr.it/mgd/ or by contacting mgd.staff@ibbr.cnr.it.
Keywords: Occurrence, Barley, Genebank, Agriculture, Food, Bioremediation, Biofuels, Pharma, Health, Specimen
Parent Collection: CNR-IBBR-MGG
Parent Institution: CNR-IBBR-FI
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/4ngbyr
Record Count: 1,016
Dataset Type: Occurrence
Dataset subtype: Observation
Description: The dataset comprises more than 1000 progenies obtained by crosses between various cultivars of Olea europaea subsp. europaea which are maintained in clonal orchards in Central Italy (Umbria, Lazio, Toscana). Parent cultivars are kept by CNR-IBBR in Perugia, Umbria, Italy. Overall, the CNR-IBBR-PG Olive collection comprises about 1,700 different accessions, including clones and crosses of many European and extra-European varieties. The main goal is the long-term preservation of the olive biodiversity as a source of genetic material for selecting and cultivating new Olive tree varieties and cultivars with specific characteristics . Molecular identification, morphological characterization, and bio-agronomic and metabolic evaluation are currently underway.
Keywords: Occurrence, Olea europaea subsp. europaea, Clonal orchards, Controlled crosses, Open pollination, Olive trees., Observation
Parent Collection: CNR-IBBR-OLIVE-PG
Parent Institution: CNR-IBBR-PG
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/qwefvq
Record Count: 1,175
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: A total of 192 populations of Quercus cerris from the eastern Mediterranean Basin (Italy, Balkan peninsula, Anatolia) were genotyped with six polymorphic chloroplast microsatellites, and the genetic diversity and differentiation of the populations were evaluated. DNA samples are kept in collection at -20° C and available for research use only.
Keywords: Occurrence, Specimen, Turkey oaks, Forest tree populations, Intraspecific biodiversity, Range-wide genetic variability, Quercus cerris L.
Parent Collection: CNR-IBBR-DNAFOR
Parent Institution: CNR-IBBR-FI
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/3ccqf4
Record Count: 1,167
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: Some 1168 silver fir trees from 24 natural populations sampled across italy and the Balkanian peninsula have been fully genotyped using a set of 16 SSR loci. Needles have been collected from georeferenced, individual trees in the forest, transported to the lab and kept at -80 °C for long-term storage. DNA has been extracted from each tissue sample for purpose of population genetic studies and evolutionary history reconstruction, and it is currently maintained at -20 *C for future research.
Keywords: Occurrence, Abies alba, Gene flow, Silver fir, Conservation, Genetic diversity, Forest trees, Specimen
Parent Collection: CNR-IBBR-DNAFOR
Parent Institution: CNR-IBBR-FI
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by/4.0/legalcode
doi: https://doi.org/10.15468/u63jc7
Record Count: 718
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: Genomic DNA has been extracted from 718 Douglas fir trees from 29 planting sites across Italy (from the Eastern Alps to the Southern Apennines to Sicily and Sardina). Most sampled stands are old plantations established in the 1920s-1930s (about 90-100 years old), while several others are 40-50 years old. The project’s main goal is to establish the genetic origin of the propagation material used in afforestation using SSR markers.
Keywords: Occurrence, Alien species, Douglas fir, Forest Plantations, Italy, Pseudotsuga menziesii, Specimen
Parent Collection: CNR-IBBR-DNAFOR
Parent Institution: CNR-IBBR-FI
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/224jzj
Record Count: 712
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: The dataset derives from the first large-scale analysis using nuclear molecular markers to assess the genetic diversity and structure of Cupressus sempervirens L. Genetic and fossil data were combined to infer the possible role of human activity and evolutionary history in shaping the diversity of cypress populations. Thirty populations with six polymorphic nuclear microsatellite markers were analyzed. Dramatic reductions in heterozygosity and allelic richness were observed from east to west across the species range. Structure analysis assigned individuals to two main groups separating the central Mediterranean and eastern populations. The two main groups could be further divided into five subgroups, which showed the following geographical distributions: Turkey with the Greek islands Rhodes and Samos, Greece (Crete), Southern Italy, Northern Italy, and Tunisia with Central Italy. This pattern of genetic structure is also supported by SAMOVA and Barrier analyses. Palaeobotanical data indicated that Cupressus was present in Italy in the Pliocene, Pleistocene, and Holocene. Furthermore, the survey showed that Italian cypress populations experienced bottlenecks resulting in reduced genetic diversity, allelic richness, and higher genetic differentiation. Recent colonization or introduction may also have influenced levels of diversity detected in the Italian populations, as most individuals in this range today have multilocus genotypes also present in the eastern range of the species. The data reveal a new interpretation of the history of cypress distribution characterized by ancient eastern populations (Turkey and Greek islands) and a mosaic of recently introduced trees and remnants of ancient, depauperate populations in the central Mediterranean range.
Keywords: Occurrence, Cypress, Mediterranean, NuSSR, Simple sequence repeats, Italy, Greece, Turkey, Specimen
Parent Collection: CNR-IBBR-DNAFOR
Parent Institution: CNR-IBBR-FI
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/q6aj5s
Record Count: 319
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: Collection of hybrid seedlings of Olea europaea subsp. europaea obtained from controlled crosses between Leccino x Dolce Agogia olive clonal varieties, growing in open field in two localities in Italy, Perugia and Boneggio (PG). Most clones have been multiplied by grafting. The Leccino variety is thought to be resistant to Xylella fastidiosa (Xanthomonadaceae).
Keywords: Occurrence, Olive, Olea europaea subsp. europaea var. europaea, Cultivars, Controlled crosses, Controlled pollination, Grafts., Specimen
Parent Collection: CNR-IBBR-OLIVE-PG
Parent Institution: CNR-IBBR-PG
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/k2pzpk
Record Count: 417
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: The frozen collection consists of over 3,000 transgenic and mutant strains of non-parasitic nematodes, Caenorhabditis elegans species, accumulated over forty years. The collection, established in the early ’80s by Dr. Paolo Bazzicalupo, is kept in triplicate, is unique in Italy, and supports numerous Italian groups. C. elegans is the only multicellular animal model that can be frozen and stabs are stable for decades. Preservation techniques: Cryopreservation of L1 larval stage worms in 1 mL freezing solution containing Na Cl 0.1M, phosphate buffer pH 6.2, Glycerol 30%. Services: Distribution of strains to the Italian C. elegans community. Local conservation of strains from CAENORHABDITIS GENETICS CENTER (CGC). Genotyping and phenotyping. Competence / Expertise: Maintenance of C. elegans strains, Genetic crosses, Molecular biology, Anatomical methods, Neurobiology, Toxicology, Implementation of nutraceuticals, Genetic screens, Drug screens, Transgenesis. Quality: Genotyping and phenotyping of strains before and after freezing, including viability test. The collection is maintained as triplicate copies in 2 different -80° Ultrafreezers and 1 in L.N.
Keywords: Occurrence, Genetics, Animal model, Invertebrate, Non parasitic nematode, Specimen
Parent Collection: CNR-IBBR-CELITABASE
Parent Institution: CNR-IBBR-NA
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/arjsuy
Record Count: 501
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: About 600 endophitic fungi isolated from Humulus lupulus and Crocus sativus and about 200 strains of lignicolous fungi from various forest environments of central Italy. Each strain was isolated in PDA medium, sub-cultured and stored in pdb-glicerol at -80 °C. Strain typing is ongoing by molecular analysis of ITS region. The collection will be screened for identification of potential biocontrol agents and enzymatic activities and metabolites of biotechnological interest.
Keywords: Occurrence, Biotechnology, Secondary metabolites, Cellulase, Lectins, Biocontrol, Specimen
Parent Collection: CNR-IBBR-FABI
Parent Institution: CNR-IBBR-PG
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/unnc2d
Record Count: 216
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: The dataset comprises 220 clonal accessions of the genus Citrus (Rutaceae), recognized for their agronomic, historical, and ornamental significance. The plants are cultivated in open fields. Maintenance: Callus and seeds are stored under controlled temperature and humidity conditions. Germination and reproduction protocols are periodically implemented to ensure the replacement and reintegration of seeds into the collection. Multiplication: Propagation is primarily achieved through seeds and cuttings. The main objective of the PPGR collection is to safeguard the genetic resources of perennial plants that are valuable for Italian and Mediterranean agriculture.
Keywords: Occurrence, Preservation of neglected species, Local varieties and cultivars, Agriculture, Fruit trees, Lemon trees, Specimen
Parent Collection: CNR-IBBR-PPGR
Parent Institution: CNR-IBBR-FI
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by/4.0/legalcode
doi: https://doi.org/10.15468/9868ye
Record Count: 513
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: Tissue and DNA samples from more that 500 individuals of Pinus heldreichii var. leucodermis from the italian range of the species (Basilicata and Calabria, Southern Italy). Needles have been collected from georeferenced, individual trees in the forest, transported to the lab and kept at -80 °C for long-term storage. DNA has been extracted from each tissue sample for purpose of population genetic studies and evolutionary history reconstruction, and it is currently maintained at -20 *C for future research.
Keywords: Occurrence, Bosnian pine, Pinus heldreichii var. leucodermis, Pino loricato, Pollino, Heldreich's pine, Specimen
Parent Collection: CNR-IBBR-DNAFOR
Parent Institution: CNR-IBBR-FI
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/tmkk2g
Record Count: 122
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: The dataset consists of more than 100 minor cultivars of Olive trees from central Italy (Umbria) maintained in triple in the field in three different localities (Boneggio, Castiglione del Lago, Amelia). The main goal is the long-term preservation of sources of genetic material for the selection and development of new cultivars.
Keywords: Occurrence, Olea europaea subsp. europaea, Clonal orchards, Controlled crosses, Open pollination, Olive trees, Specimen
Parent Collection: CNR-IBBR-OLIVE-PG
Parent Institution: CNR-IBBR-PG
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/7hkc3t
Record Count: 122
Dataset Type: Occurrence
Dataset subtype: n/a
Description: A collection of 50 accessions of the grain legume Vicia ervilia adapted to various areas of the Mediterranean basin. The whole collection consists of 50 and 47 accessions of the annual legumes Vicia ervilia and Lathyrus cicera respectively, used at the experimental level as protein source in feed formulations and 24 accessions of the perennial grass Panicum virgatum, used for bio-energy production. Accessions are maintained in paper bags at -20 °C.
Keywords: Occurrence, Vicia ervilia, Bitter vetch, Specimen
Parent Collection: CNR-IBBR-VLAPP
Parent Institution: CNR-IBBR-PG
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/bcvuf5
Record Count: 63
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: MEPP preserve about 350 strains. The strains are mainly isolated from the Mediterranean agro-food systems as well as from spontaneous perennial and herbaceous plants, various microorganisms (bacteria, yeasts and fungi) of agro-food importance and with pathological behaviour are included. Microrganisms are isolated from different Mediterranean geographical areas. MEPP hosts also strains form collection of other Research centre or University. Preservation Techniques - Cryo: Ultrafrezeer at- 80 °C, with mycelium plug in water glycerol (10-50% v/V); Fresh cultures: Refrigerator at 4 °C in agar slants or Petri dishes with mycelium.
Keywords: Occurrence, Filamentous fungi, Actinomycetes, Specimen
Parent Collection: CNR-IBBR-MEPP
Parent Institution: CNR-IBBR-FI
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/bprp46
Record Count: 84
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: The dataset includes metadata of endophytic bacteria with plant growth promoting activity and bacteria usable for bio-remedation of polluted environments from the CNR-IBBR-SUB collection, which is maintained at Institute of Biosciences and Bioresources (IBBR) in Naples, Italy. Endophytic bacteria were isolated from rice plants grown in Italy and in the State of Mali (West Africa), while polycyclic aromatic hydrocarbon degrading bacteria were isolated from the industrial zone of the port of Marghera (Venice, Italy). Microorganisms are cryopreserved at -80 °C resuspended in growth media containing cryoprotectants (glycerol). Frozen microorganisms can be revived by thawing at 37 °C and inoculating into fresh culture medium. The main aim of the collection is to study bacteria interacting with legumes and cereals (e.g., N-fixation, phytohormones production, etc.) and their ability to improve host plants resistance to abiotic stresses.
Keywords: Occurrence, Genomics, Proteomics, Metabolomics, Bacteria, Rhizobacteria, Specimen
Parent Collection: CNR-IBBR-SUB
Parent Institution: CNR-IBBR-NA
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
doi: https://doi.org/10.15468/4ghd28
Record Count: 39
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: The dataset includes 39 varieties of Olea sativa (natural and cultivated), highly representative of the species' Mediterranean genetic resources. Several accessions are stored in vitro and maintained in a greenhouse. Plants are grown in open fields. Maintenance: the callus and the seeds are stored in controlled temperature and humidity conditions. The germination and reproduction are periodically carried out to ensure the replacement and reintegration of the seeds in the collection. Multiplication: the propagation is usually made by seed and cuttings The main objective of the PPGR collection is to safeguard the genetic resources of perennial plants that are important for Italian and Mediterranean agriculture.
Keywords: Occurrence, Olea europaea, Olivetrees, Specimen
Parent Collection: CNR-IBBR-PPGR
Parent Institution: CNR-IBBR-FI
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by/4.0/legalcode
doi: https://doi.org/10.15468/4tsjth
Record Count: 169
Dataset Type: Occurrence
Dataset subtype: Specimen
Description: The dataset contains the metadata of 169 cultivars of Vitis vinifera ssp. sativa from Sicily, including DOC, not DOC, and Minor Islands grapevine clones. The plants are grown in open fields. Maintenance: The callus and the seeds are stored in controlled temperature and humidity conditions. Germination and reproduction protocols are periodically carried out to ensure the replacement and reintegration of the seeds in the collection. Multiplication: Propagation is usually made by seed and cuttings. The main objective of the PPGR collection is to safeguard the genetic resources of perennial plants that are important for Italian and Mediterranean agriculture.
Keywords: Occurrence, Vitis vinifera ssp. sativa, Specimen
Parent Collection: CNR-IBBR-PPGR
Parent Institution: CNR-IBBR-FI
Publisher: Consiglio Nazionale delle Ricerche, Istituti del Dipartimento di Scienze Bio-Agro Alimentari (CNR-DiSBA)
License: http://creativecommons.org/licenses/by/4.0/legalcode